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16Masaru Tomita
![]() Summary for 2004 [at-glance overview of Masaru Tomita work for the selected year as suggested by data mining algorithms]This is an Authoratory overview of author Masaru Tomita. According to available data, in 2004 Masaru Tomita published at least 16 articles. This work was completed in collaboration with several authors including Nishioka, Takaaki and Itaya, Mitsuhiro. Many other authors have collaborated with Masaru Tomita as well. There is no information about the funding or the grants awarded to support this work.
Masaru Tomita has rank 57 when compared to all other authors using the keyword Species Specificity. Analysis of the article abstracts and the titles suggests that Masaru Tomita professional interests are focused around "sustained mapk activation", "archaeal type rnase" and "capillary electrophoresis-mass spectrometry". These might also be referred to as "amino acids", "rnase hi" or "mapk activation". Statistical analysis shows that Masaru Tomita's writing is likely to contains terms "rnase", "amino", "gene", "activity", "acids" and "capillary".
The affiliation of Masaru Tomita is uncertain, but might be related to Institute for Advanced Biosciences, Keio University, 14-1, Baba, Tsuruoka, Yamagata, 997-0035, Japan. Luckily, several email addresses are on file. Images [images we found on the Internet for Masaru Tomita]loading...
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Alternative names (1) [other authors with names similar to Masaru Tomita]Year 2004 Charts [Masaru Tomita frequent coauthors and the most common unique vocabulary terms for the selected year]Historical Performance Charts [graphical overview of Masaru Tomita publication and funding history for the range of years]Emails (5) [email addresses extracted from Masaru Tomita affiliations]hidden to prevent spam, click here to reveal Masaru Tomita Coauthors (34) [all coauthors with the number of joint publications] Other [context-specific ads]Affiliations (7) [condensed summary of the Masaru Tomita affiliations, the leading number and the color conveys importance]- 4Institute for Advanced Biosciences, Keio University, 14-1, Baba, Tsuruoka, Yamagata, 997-0035, Japan.
3Institute for Advanced Biosciences, Keio University, Endo 5322, Fujisawa Kanagawa, 252-8520, Japan. 2Institute for Advanced Biosciences and Bioinformatics Program, Keio University, 403-1 Nipponkoku, Daihoji, Tsuruoka, Yamagata 997-0017, Japan. 2Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan. 2Laboratory for Bioinformatics, Institute for Advanced Biosciences, Keio University, Fujisawa, Kanagawa 252-8520, Japan. 1Department of Genetic Disease Research, Osaka City University Graduate School of Medicine, Asahi-machi 1-4-3 Abeno, 545-8585 Osaka, Japan. 1Department of Pediatrics, Keio University School of Medicine, Tokyo, Japan.
Key Opinion Leader In [Masaru Tomita is considered a key opinion leader in any keyword where the rank of 5 is achieved, the leading number before the keyword shows the author's rank as compared to all other authors]- 57Species Specificity | 74Oryza sativa | 78Electrophoresis, Capillary | 101Computational Biology | 116Gene Expression | 125Escherichia coli | 128Computer Simulation | 142Models, Biological | 270Gene Expression Profiling | 447Time Factors
Keywords (32) [keywords assigned to Masaru Tomita articles by PubMed, the leading number and the color conveys importance]- 6Animals | 6Humans | 4Escherichia coli | 4Time Factors | 3Oryza sativa | 3Gene Expression Profiling | 3Computer Simulation | 3Gene Expression | 3Species Specificity | 3Computational Biology | 3Mice | 3Electrophoresis, Capillary | 3Models, Biological | 3Molecular Sequence Data | 2Base Sequence | 2Base Composition | 2Sequence Alignment | 2Ribonuclease H | 2Genetic Complementation Test | 2DNA, Complementary | 2Mass Spectrometry | 2Algorithms | 2Bacillus subtilis | 2Sequence Homology, Nucleic Acid | 2Drosophila melanogaster | 2Cloning, Molecular | 2Genome, Bacterial | 2Amino Acid Sequence | 2Introns | 2Amino Acids | 2Sequence Analysis, DNA | 1Nerve Tissue Proteins
Masaru Tomita Unique Vocabulary (96) [single words, word pairs and phrases obtained by analysis of abstracts and titles, the leading number and the color conveys importance; Masaru Tomita might be a good expert witness on these terms]- 34rnase | 22amino | 15gene | 15activity | 14acids | 14capillary | 13hi | 13simulation | 12using | 12rna | 11analysis | 11splice | 11type | 10alternative | 10acid | 10model | 10method | 10expressed | 10can | 10activation | 10mapk | 9different | 9spectrometry | 9cell | 9ms | 8archaeal | 8pseudogenes | 8sequences | 8sites | 7vitro | 7metabolites | 6system
- 14amino acids | 13rnase hi | 9mapk activation | 8amino acid | 8type rnase | 8splice sites | 7rnase activity | 7hox genes | 7gastrointestinal tract | 5alternative splicing | 5sustained mapk | 5archaeal type | 5mass spectrometry | 4expressed pseudogenes | 4capillary electrophoresis-mass | 4bacillus subtilis | 4electrophoresis-mass spectrometry | 4full-length cdna | 4sum relative | 4dsrnase activity | 4relative entropy | 4capillary electrophoresis | 4gt-ag gc-ag | 4using full-length | 3tokodaii rnase | 3double-stranded rna | 3whole organelle | 3comparative analyses | 3consensus sequences | 3subtilis rnase | 3large number | 3hi homologue
- 5sustained mapk activation | 5archaeal type rnase | 4capillary electrophoresis-mass spectrometry | 4sum relative entropy | 3subtilis rnase hi | 3rnase hi homologue | 3tokodaii rnase hi | 3bacillus subtilis natto | 3rna strand rna | 3type rnase gene | 3along anteroposterior axis | 3hox genes along | 3physical maps bacillus | 3archaeon sulfolobus tokodaii | 3analysis amino acids | 3role expressed pseudogenes | 3adult gastrointestinal tract | 3thermoacidophilic archaeon sulfolobus | 3synthetic vitro glycolysis | 3potential regulatory sequences | 3weighted sum relative | 3maps bacillus subtilis | 2hi thermoacidophilic archaeon | 2rna dna hybrid | 2stability homologous coding | 2position-specific expression hox | 2cdna various eukaryotes | 2gc-ag splice site | 2analyses alternative splicing | 2hi can cleave | 2nrc-1 archaeal rnase | 2dependent continual ngf
Reader's Comments (0) [comments posted by readers of Masaru Tomita profile]Funding (0) [selected NIH grants to Masaru Tomita and the award amounts for recent years]- award information is not available
Masaru Tomita Articles (16) [selected PubMed articles for the year 2004 with the links to a full text at PubMed][Refinement of genome-wide data] (2004) >> 3Saito, Rintaro, 9Suzuki, Harukazu, 16Tomita, Masaru.Comparative analysis of physical maps of four Bacillus subtilis (natto) genomes. (2004) >> Institute for Advanced Biosciences and Bioinformatics Program, Keio University, 403-1 Nipponkoku, Daihoji, Tsuruoka, Yamagata 997-0017, Japan. 5Itaya, Mitsuhiro, 2Qiu, Dongru, 3Fujita, Kyoko, 16Tomita, Masaru, 4Ohashi, Yoshiaki, 1Ohshima, Hideyuki, 2Sakuma, Yuko, 5Tanaka, Teruo.Sustained MAPK activation is dependent on continual NGF receptor regeneration. (2004) >> Institute for Advanced Biosciences, Keio University, 14-1, Baba, Tsuruoka, Yamagata, 997-0035, Japan. 2Qiu, Dongru, 16Tomita, Masaru, 9Kikuchi, Shinichi, 1Mao, Likai.Simultaneous determination of the main metabolites in rice leaves using capillary electrophoresis mass spectrometry and capillary electrophoresis diode array detection. (2004) >> Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0035, Japan. 9Nishioka, Takaaki, 4Soga, Tomoyoshi, 16Tomita, Masaru, 9Sato, Shigeru.Toward large-scale modeling of the microbial cell for computer simulation. (2004) >> Institute for Advanced Biosciences, Keio University, 403-1 Daihoji, Tsuruoka, Yamagata 997-0017, Japan. 1Nakayama, Yoichi, 16Tomita, Masaru, 2Robert, Martin, 2Kanai, Akio, 4Ishii, Nobuyoshi.Identification of the first archaeal Type 1 RNase H gene from Halobacterium sp. NRC-1: archaeal RNase HI can cleave an RNA-DNA junction. (2004) >> Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan. 5Itaya, Mitsuhiro, 16Tomita, Masaru, 15Yanagawa, Hiroshi, 3Ohtani, Naoto.Application of capillary electrophoresis-mass spectrometry to synthetic in vitro glycolysis studies. (2004) >> Institute for Advanced Biosciences, Keio University, Tsuruoka, Japan. 9Nishioka, Takaaki, 10Mori, Hirotada, 4Soga, Tomoyoshi, 16Tomita, Masaru, 4Ohashi, Yoshiaki, 1Itoh, Aya.A general computational model of mitochondrial metabolism in a whole organelle scale. (2004) >> Institute for Advanced Biosciences, Keio University, Endo 5322, Fujisawa, Kanagawa, 252-8520, Japan. 1Yugi, Katsuyuki, 16Tomita, Masaru.Qualitative and quantitative analysis of amino acids by capillary electrophoresis-electrospray ionization-tandem mass spectrometry. (2004) >> Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata, Japan. 9Nishioka, Takaaki, 4Soga, Tomoyoshi, 16Tomita, Masaru, 2Robert, Martin, 1Kakazu, Yuji.Computational comparative analyses of alternative splicing regulation using full-length cDNA of various eukaryotes. (2004) >> Laboratory for Bioinformatics, Institute for Advanced Biosciences, Keio University, Fujisawa, Kanagawa 252-8520, Japan. 3Itoh, Hitomi, 16Tomita, Masaru, 2Washio, Takanori.A new role for expressed pseudogenes as ncRNA: regulation of mRNA stability of its homologous coding gene. (2004) >> Department of Genetic Disease Research, Osaka City University Graduate School of Medicine, Asahi-machi 1-4-3 Abeno, 545-8585 Osaka, Japan. 10Wynshaw-Boris, Anthony, 3Saito, Rintaro, 2Yoshida, Noriyuki, 16Tomita, Masaru, 2Yano, Yoshihisa, 2Yoshiki, Atsushi, 3Hirotsune, Shinji.Characterization of the splice sites in GT-AG and GC-AG introns in higher eukaryotes using full-length cDNAs. (2004) >> Laboratory for Bioinformatics, Institute for Advanced Biosciences, Keio University, Fujisawa, Kanagawa 252-8520, Japan. 3Itoh, Hitomi, 16Tomita, Masaru, 2Washio, Takanori, 1Tsutsumi, Akihiro, 1Kitamura-Abe, Sumie.The 'weighted sum of relative entropy': a new index for synonymous codon usage bias. (2004) >> Institute for Advanced Biosciences, Keio University, Fujisawa 252-8520, Japan. 3Saito, Rintaro, 16Tomita, Masaru, 3Suzuki, Haruo.Position-specific expression of Hox genes along the gastrointestinal tract. (2004) >> Department of Pediatrics, Keio University School of Medicine, Tokyo, Japan. 3Yahagi, Naohisa, 3Kosaki, Rika, 16Tomita, Masaru, 18Shimada, Hiroyuki, 18Takahashi, Takao, 2Mitsuhashi, Takayuki, 6Ito, Taichi, 10Kosaki, Kenjiro.A multi-algorithm, multi-timescale method for cell simulation. (2004) >> Institute for Advanced Biosciences, Keio University, Fujisawa, Kanagawa, 252-8520, Japan. 1Kaizu, Kazunari, 16Tomita, Masaru, 3Takahashi, Kouichi, 22Hu, Bin.Cleavage of double-stranded RNA by RNase HI from a thermoacidophilic archaeon, Sulfolobus tokodaii 7. (2004) >> Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata 997-0017, Japan. 5Itaya, Mitsuhiro, 16Tomita, Masaru, 15Yanagawa, Hiroshi, 3Ohtani, Naoto.
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